Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKLNMNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSS--GGKRVRPAFVILSSQFGKDEQ---TSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNPDFKLKIEQL-RRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISELPDGH------PKSLLLSLTKKMGSRNT |
| 3APZ Chain:A ((14-348)) | -----VADELSLLSNKLREMVLAEVP------------GVQGKQFRSTILLLMATALDV--TSELRVRQRGIAEITEMIHVASLLHDD----------------VMGNKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAMEEFPQ---LREVVDQVEKDPRNVDIALEYLGKSKGIQRARELAMEHANLAAAAIGSLPETDNEDVKRSRRALIDLTHRVITRNK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3APZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105279 for 2224 contacts (-47.3/contact) +
2D Compatibility (PS) -30115 + (NN) -16920 + (LL) 3236
1D Compatibility (HY) -16000 + (ID) 3750
Total energy: -168828.0 ( -75.91 by residue)
QMean score : 0.502
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