Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYTITNVERRSKYIVFQL-DNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSNDKKLIYSDIRRFGEIRNVASVASYPSFLE--IAPEPFTNEALTYYLNRIHQQSNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKHGGTSISDYRHADGKTGEMQLHLNVYKQP--VCKVCGSQIETKIIATRNSHYCPVCQK |
| 4PDG Chain:A ((1-270)) | -PELPEVETVRRELEKRIVGQKI---------ISIEATYPRMVLTGFE--QLKKELTGKTIQGISRRGKYLIFEIGDDFR----LISHLRMEGKY----RLATLDAPR-EKHDHLTMKFA-DGQLIYADVRKFGTWELISTDQVLPYFLKKKIGPEP-TYEDFDEKLFR-EKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLLHDSIIEILQKAIKLGGS------SALGSTGKMQNELQVYGKTGEKCSRCGAEIQKIKVAGRGTHFCPVCQQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PDG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74531 for 2121 contacts (-35.1/contact) +
2D Compatibility (PS) -26852 + (NN) -698 + (LL) 2576
1D Compatibility (HY) -21200 + (ID) 5100
Total energy: -125805.0 ( -59.31 by residue)
QMean score : 0.329
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