Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGDISIHYLNGGNTKMDGGAMFGVVPKPLWSKQYNANERNQINLPTHPILIQTAQYNLIIDAGIGNGKLSEKQ--LRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQQDEWHEFIAPNIRSKSTY-----WDK-------NKGDY------SNKLILFEKHFEPVPGIKMQHSGGHSFGHTIITIESQ-GDKAVHMGDIFPTTAHKNPLWVTAYDDYPMQSIREKERMIPYFIQQQYWFLFYHDENYFAVKYSDDGENIDAYILRETLVDNN |
| 3AJ3 Chain:A ((2-260)) | ---SDTKVYLLDGGSLVLDGYHVFWNR-----------GPGGEVRFPVYSILIEHAEGRFLIDTGYDYDHV-MKVLPFEKPIQEKHQTIPGALGLLGLEPRDIDVVVNSHFHFDHCGGNKY------FPHAKKICHRSEVPQACNPQPFEHLGYSDLSFSAEAAEARGATAQLLEGTTRANSTFEGIDGDVDLARGVKLISTPGHSIGHYSLLVEFPRRKPILFTIDAAYTQKSLETLCQAAFHIDPVAGVNSMRKVKKLAEDHGAELMYSHDMDNFKTY--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AJ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106003 for 2027 contacts (-52.3/contact) +
2D Compatibility (PS) -25410 + (NN) -5621 + (LL) 2256
1D Compatibility (HY) -9600 + (ID) 2550
Total energy: -146928.0 ( -72.49 by residue)
QMean score : 0.379
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