Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSETIFGKILTGEIPSFKVYEDDYVYAFLDISQVTKGHTLLIPKKASANIFETDEETMKHIGAALPKVANAIKRAFNPDGLNIIQNNGEFADQSVFHIHFHLIPRYENDIDGFGYKWETHEDILDNDAKQQIAEQIQAQF
3P0T Chain:B ((7-111))
---SIFTKIINRELPGRFVYEDDDVVAFLTIEPMTQGHTLVVPREEIDNWQDVDSAAFNRVMGVSQLIGKAVCKAFRTERSGLI-----IAGLEVPHLHVHVFP--TRSLSDFGF-------------------------
General information:
TITO was launched using:
RESULT:
Template:
3P0T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72111 for 748 contacts (-96.4/contact) +
2D Compatibility (PS) -11506 + (NN) -5765 + (LL) 2704
1D Compatibility (HY) -10800 + (ID) 1800
Total energy: -99278.0 ( -132.72 by residue)
QMean score : 0.631
(partial model without unconserved sides chains):
PDB file :
Tito_3P0T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P0T-query.scw
PDB file :
Tito_Scwrl_3P0T.pdb
: