Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MKKTLLASSLAVGLGIVA----GNAGHEAHASEADLNKASLAQ--------MAQ-SNDQT-LNQKPIE------------AGAYNYTFDYEGFTYHFESDGTHFA-----WNYHATGANGA-NMSAQAPATNNVEPSAVQANQVQSQEVEAPQNAQTQQPQASTSNNSQVT---A-TPTESKASEGSSVNVNAHLKQ---IAQRESGG----------------NIHAVNPTSGAAGKYQFL-QSTWDSVAPAKYKGVSPANAPESVQDAAAVKLYNTGGAGHWVTA------- |
| 3GN6 Chain:A ((22-321)) | FNPWTDAALDTIVNQALTLYAEMRVVPAHHDAFLAAIDTVSAKLRVLPGFLSLALKQMSGDSTMVKNYPETYKGVLATAYLDGVAAGTQPYFYNLFVRFADGRAARAAGFEALFETHIHPLLHAMADGPELLAYRAVLQSVVAGDRHAIYRGAEEIRSFLRRPVELPERETVTVENHVMVPEDKHAAWEPQVAILLQVAQDTFEPQDEPSGVGLPGARDNRYYRKALSTEILRNAHADGGLRAYIMHGVWESVWDHENSHLDPRFLAAAGPVGAAAV---VGPVEPFYLTRRLVVAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 42015 for 1520 contacts (27.6/contact) +
2D Compatibility (PS) -23870 + (NN) -3586 + (LL) 188
1D Compatibility (HY) -2400 + (ID) 2000
Total energy: 10347.0 ( 6.81 by residue)
QMean score : 0.140
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