Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRNRVMNSVVNKYLLHNRSIMFKNDQDVERFFYKREIENRKKHKQPSTLNVKANLEKLSLDDMQVFRFNFRH-QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFHIDDTFQAIQRVYDQLVSEV----GHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDAVLSQFGVNEIMKKWANGL-PLTDKRISPING-TIEGLPPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYP--IRQSHKAIKQIAKSIDEDVTQNN |
| 3WJ1 Chain:A ((55-304)) | ------------------------------------------------------------ETSINARVYFPKAKGPYGVLVYLHGGGFVIGDVESYDPLCRAITNACNCVVVSVDYRLAPEYKFPSAVIDSFDATNWIYNNLDKFDGEMGIAIAGDSAGGNLAAVVALLSKG--KLDLKYQILIYPAVGFDSVSRSMIE-Y-SDGFFLTREHIEWFGSQYLRSPADLLDFRFSPIIAQDLSGLPPALIITAEYDPLRDQGEAYANRLLQAGVPVTSVRFNNVIHGFLSFFPLIDQGKDAIGLIGSVLRRTFYDK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WJ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133590 for 2215 contacts (-60.3/contact) +
2D Compatibility (PS) -25531 + (NN) -12576 + (LL) 4972
1D Compatibility (HY) -8800 + (ID) 2100
Total energy: -177625.0 ( -80.19 by residue)
QMean score : 0.484
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