Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKKLLTLFIVSMLILTACGKKESATTSSKNGKPLVVIYGDYKCPYCKELDEKVM-PKLRKNYIDNHKVEYQFVNLAFLGKDSIVGSRASHAVLMYAPKSFLDFQKQL-F-AAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTK-DSKSWKAAEKDK-KIAKDNHIKTTPTAFINGEKVEDPYDYESYEKLLKDKIK--
3GYK Chain:A ((2-175))-NANRDSLF----------NDPNAPVLGNPEGDVTVVEFFDYNCPYCRR-----AMAEVQGLVDADPNVRLVYREWPILGEGSDFAARAALAARQQ--GKYEAFHWALMGMSGK-------ANETGVLRIAREVGLD-------TEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVVEDALVPGFVEQSQLQDAVDRARKAA


General information:
TITO was launched using:
RESULT:

Template: 3GYK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24805 for 1319 contacts (-18.8/contact) +
2D Compatibility (PS) -17827 + (NN) -6525 + (LL) 2960
1D Compatibility (HY) -5200 + (ID) 1400
Total energy: -52797.0 ( -40.03 by residue)
QMean score : 0.483

(partial model without unconserved sides chains):
PDB file : Tito_3GYK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GYK-query.scw
PDB file : Tito_Scwrl_3GYK.pdb: