Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKIVLITGGNKGLGYASAEALKALGYKVYIGSRNDVRGQQASQKL-----GVHYVQLDVTSDYSVKNAYNMIAEKEGRLDILINNAGISGQFSAPSKLTPRDVEEVYQTNVFGIVRMMNTFVPLLEKSEQPVVVNVSSGLGSFGMVTNPETAESKVNSLAYCSSKSAVTMLTLQYAKGLP--NMQINAADPGATNTDLVGDF--------------S-NNSKHVSEGIKPIIQLATIGADGPTGTFIN-GDGEMPW |
| 3AWD Chain:A ((12-260)) | DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNR--------PQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGFTVW |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91152 for 1985 contacts (-45.9/contact) +
2D Compatibility (PS) -24764 + (NN) -9888 + (LL) 208
1D Compatibility (HY) -8000 + (ID) 3000
Total energy: -136596.0 ( -68.81 by residue)
QMean score : 0.529
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