Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTSNTKTPKPVLIAGPCVIESLENLRSIAIKLQPLANN-ERLDFYFKASFDKANRTSLESYRGPGLEKGLEMLQTIKDEFGYKILTDVHESYQASVAAKVADILQIPAFLCRQTDLIVEVSQTNAIVNIKKGQFMNPKDMQYSVLKALKTRDSSIQSPTYETALKNGVWLCERGSSFGYGNLVVDMRSLKIMREFAPVIFDATHSVQMPGGANGKSSGDSSFPPILPRAAAAVGIDGLFAETHIDPKNALSDGANMLKPDELEHLVTDMLKIQNLF
1LRO Chain:A ((3-256))---------KFLVIAGPCAIESEELLLKVGEEIKRLSEKFKEVEFVFKSSFDKANRSSIHSFRGHGLEYGVKALRKVKEEFGLKITTDIHESWQAEPVAEVADIIQIPAFLCRQTDLLLAAAKTGRAVNVKKGQFLAPWDTK-NVVEKLKFGGA------------KEIYLTERGTTFGYNNLVVDFRSLPIMKQWAKVIYDATGSVQLPGGLG----GMREFIFPLIRAAVAVGCDGVFMETHPEPEKALSDASTQLPLSQLEGIIEAILEIREVA


General information:
TITO was launched using:
RESULT:

Template: 1LRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129116 for 2178 contacts (-59.3/contact) +
2D Compatibility (PS) -27429 + (NN) -13771 + (LL) 984
1D Compatibility (HY) -24800 + (ID) 6400
Total energy: -200532.0 ( -92.07 by residue)
QMean score : 0.584

(partial model without unconserved sides chains):
PDB file : Tito_1LRO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LRO-query.scw
PDB file : Tito_Scwrl_1LRO.pdb: