Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIGFGGNKDKREYFENATAQIGA-KLLVCDIREQFFNDVL---F-KPKYGY---GKYFNPCIDCHANMFRNAFYKMLELDADFVLSGEVLGQRPKSQRKEALNQVRKLVREVGEEARFDLILDRTQASGEKPQFLDELLLRPMSAKLLEPTFMEKKGWVDREKLLDVSGRGRARQLQMIKDYGLKYYE-----KPGGGCLLTDIQVSNKIKNLKEYREMVFEDGVIVKNGRYFVLPHNARLVVARNEEENHKLDIEHPLMDKIELLGCKGPLSLVDKNASQEDKELAGRIALGYAKTLKNQAYLIQIGNEKRELYPLDKENAREYLFA |
1K92 Chain:A ((9-207)) | -VGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDE-EDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKG--NDIERFYRYG-LLT----------------------NA---ELQIYKPWLDT----------DFIDEL------G-GRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEYLNSSVKIVNPIMGVKFWDESVKIPAEEVTVRFEQGHPVALNGKTFSDDVEMMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHAHGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K92.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65282 for 1425 contacts (-45.8/contact) +
2D Compatibility (PS) -20311 + (NN) -5098 + (LL) 4120
1D Compatibility (HY) 0 + (ID) 1500
Total energy: -88071.0 ( -61.80 by residue)
QMean score : 0.441
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