Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MKKYSAIPTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYEAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFHQYATYKDRILDKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGVSGLHFHTHCE-QNADALCRTLEHVERHFKPYLE---NMAWVNFGGGHHITRSDYD-----VNLLIQTIKDFKERYHNTEVILEPGEAIGWQCGFLIASVIDIVQ-NDQEIAILDASFSAHMPDCLEMPYRPSILKVSVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLHYTIVKNNSFNGVPLPSLAKIDSQGFKILKSFSYEDYKNRN |
| 1F3T Chain:A ((14-422)) | RFLEGFNTRDALCKKIS-GDPFFVADLGDIVRKHETWKKC--LPRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQRVRG---IGVPPEKIIYANPCKQISHIRYARD------------------------SGVDVMTFDCVDELEKVAKTHPKAKMVLRISTVKFGAKVEDCRFILEQAKKLNI-DVTGVSFHVGSGSTDASTFAQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEPGRYYVASAFTLAVNVIAKKVT-QSFMYYVNDGVYGSFNCILYDHAVVRP----------LPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSSFNGFQSPTIYYVVSGLPDHVVRELKS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F3T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185181 for 2977 contacts (-62.2/contact) +
2D Compatibility (PS) -37933 + (NN) -11970 + (LL) 3112
1D Compatibility (HY) -3600 + (ID) 2750
Total energy: -238322.0 ( -80.05 by residue)
QMean score : 0.409
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