Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNLLI-----QAENAIALLFLLNDKNLKGKIDLIYIDPPFATNNHFTI---TNGRATTISNSKNGDIAY--------------SDKVVGMDFMEFLKQRLVLLKELLSEQGSIYVHTDYKIGHYVKVMLDEIFGIQNFRNEITRIKCNPKNFKRIGYGNIKD----MILFYSKGKNPIFNEPKIPYTPQDLEKRFPKIDKDKRRYTTVPIHAPGEVESGECSKAFK-------GMLPPKGRHWRTDIAT-LERW------DKEGLIEYSNNNNPRKKIYA-------LEQVGKRVQDIWEFKD---PQYPSYPTEKNAQLLDLIIKTSSNKDSIVLDCF-CGSGTTLKSAF---LLQRKFIGIDNSDLAIQACKNKLETIT-KDLFVSQNFYDFLVF--------- |
| 4D7E Chain:A ((1-413)) | METLLVVGAGPKALAVAAKSHVLRQLGLSAP-RVIAVEAHAVGGNWLASGGWTDGR-HRLGTSPEKDIGFPYHSTWARGHNREINEAMMAFSWTSFLVEHGTYAEWIDRGRPSPQHHVWAKYLQWVARKID----LELVLGKVRTIR-QGWSVEVAGATTELEADGLMITGPGQSTKALAAHPRVLS----IAEFWDLAGKRKLPISSRAAVIGGGETAGSALDELVRHEMLTISVISPMASYFENSLFSDPTKWNALSIQERRDVIRRTDRGVFSVRVQESLLGDNRVHHLQGRVTRIVGQGDGVAVTLRNEMRADQVHNFDLVVDATGGQPLWFLDLFDSESADLLELAVGGPLTQQRIESSIGYDLAVTGLGAKLYLPNMAALAQGPGFPNLSCLGELSDRVLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D7E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53073 for 2573 contacts (-20.6/contact) +
2D Compatibility (PS) -34213 + (NN) -6711 + (LL) 628
1D Compatibility (HY) -11600 + (ID) 2750
Total energy: -107719.0 ( -41.87 by residue)
QMean score : 0.073
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