Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MIIAHSNEIAHPIFKSADKLFTLYQGDCNEVLPQFENAFDLIFADPPYFLSNDGLSIQSGKIVSVNKGDWDKENGINDIDEFNYQWINNAKKALKNTGSLLISGTYHNLFSLGRILQKLDFKILNLITWQKTNPPPNFSCRYLTHSAEQIIWARKSYKHKHVFNYEILKKINNNKQMRDVWNFPAIAPWEKANGKHPTQKPLALLVRLLLMASDDNSLIGDPFSGSSTTGIAANLLKREFIGIEKESRFIKISMNRKLELDARHQEIRSKIKDLNFQ----------------- |
| 4QQR Chain:A ((12-295)) | SFNFLIYGKTGWIGGLLGKLCEAQGITYTY-GSGRLDRQSIVADIESVKPSHVFNAAGVTGRPNV-------DWCESHKVETIRT-NVAGTLTLADICREKGLVLINYATGCIFEYDSGHPLGSGIGF------KEEDTPNFTGSFYSKTKAMVEELLKNYEN--VCTLRVRMPISSDLTNPRNFITKIARYEKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVS-------HNEILEMYRDYIDPSFTWKNFTEPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QQR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6937 for 2039 contacts (3.4/contact) +
2D Compatibility (PS) -26852 + (NN) -5622 + (LL) 1756
1D Compatibility (HY) -1200 + (ID) 1650
Total energy: -26631.0 ( -13.06 by residue)
QMean score : 0.237
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