Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKENLPIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLISTIQNALNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKE-FDIVKFSLDAIDLKAFERVDKPYSKDINKILEGILSFSQIYQGQLVAEVLLIKGVNDSANNLKLIADFLKKINTARVDLSTIDRPSSFKAPKLSEDELLKC--SLFFEGLCVSLPKRSTAQAKKLVSCGIDELLALISRRPLSAEEAPLILDPNAFKHLETLLNHKQITIKKVGSLEFYCAF |
| 4M7T Chain:A ((21-270)) | MDKLFSMIEVEVNSQ-----------------CNRTCWYC--PNSVSKRKETGEMDPALYKTLMEQLSSL--DFAGRISFHFYGEPLLCKNLDLFVGMTTEYIPRARPIIYTNGDFLTEKRLQTLTELGIQKFIVTQHAGAKHKFRGVYDQLAGADKEKVVYLDHSDLVLSNRGGILDNIPANMSCMVPSNLAVVTV-----LGNVLPCFEDFNQKMVMGNIGEQHISDIWHNDKFTSFRKMLKEGHRGKSDLCKNCN--------NVSVQTEEQYDYVL------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4M7T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -74417 for 2006 contacts (-37.1/contact) +
2D Compatibility (PS) -24817 + (NN) -5611 + (LL) 4924
1D Compatibility (HY) -4400 + (ID) 1450
Total energy: -105771.0 ( -52.73 by residue)
QMean score : 0.221
|
|
|