Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MKRILFFLAATTFLLRAETASATINTTVDPNVMFSESSTGNVKKDRKRVLKSMVDLEKERVKNFNQYSETKMSKGDLSAFGAFFKGS--LEDCVEQKIC--YYEHRNGKVSFVVNDREKFYKHVLKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRVSQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKTQNSSNPDLDPMTNANTLKETASKEPETSSKKEKKPKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK-- |
| 1AQU Chain:A ((9-296)) | EYYEVFGEFRGVLMDKRFTKYWEDVEMFLARPDDLVIATYPKSGTTWISEVVYMIYKEGDAIFNRIPYLECRNEDLINGIKQLKEKESPRIVKTHLPPKLLPASFWEKNCKMIYLCRNAKDVAVSYYYFLLMITSYP------NPKSFSEFVEKFMQGQVPYGSWYDHVKAWWEKSKNSRVLFMFYEDMKEDIRREVVKLIEF-----LERKPSAELVDRIIQHTSFQEMKNNPSTNYTMMPEEMMNQKVSPFMRKGIIGDWKN-HFPEALRERFDEHYKQQMKDCTVKFRME |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 99172 for 2053 contacts (48.3/contact) +
2D Compatibility (PS) -29060 + (NN) -8221 + (LL) 804
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: 54145.0 ( 26.37 by residue)
QMean score : 0.223
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