Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLYSLVKKYLFSLDAEIAHEKVCQILRTLSSSPFLCRLIHSQWGYKNPKLENEILGLNFPNPLGLAAGFDKNASMLRALIAFGFGYLEAGTLTNIAQSGNEKPRLFRHIEEESLQNAMGFNNYGA--------ILGVRAFNRFAPYKTPIGINLGKNKHIEQAHALEDYQAVLNQCLNIGDYYTFNLSSPNTPNLRD--------------------LQNKVFVNELFCMAKEMTHKPL-FLKIAPDLEIDSMLEVVNSAIEAGANGIIATNTT--IDKSLVFAPKEMGGLSGKCLTKKSREIFKELAKAFFNKSV-LVSVGGISDAKEAYERIKMGASLLQIYSAFIYKGPNLCQNILKDLVKLLQKDGFLSVKEAIGADLR |
4CQA Chain:A ((77-395)) | --------------------------------------------------------LDFINPFGVAAGFDKNGVCIDSILKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVTENLILFRKRQEEDKLLSKHIVGVSIGKNK--DTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMN--FLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKK-GGVSGAKLKDISTKFICEMYN-YTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYYNLKEAIGRKHS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100102 for 2403 contacts (-41.7/contact) +
2D Compatibility (PS) -30736 + (NN) -15048 + (LL) 5432
1D Compatibility (HY) -23600 + (ID) 5450
Total energy: -169504.0 ( -70.54 by residue)
QMean score : 0.412
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