Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALFEDIQAVIAEQLNVDAAQVTPEAEFVKDLGADSLDVVELIMALEEKFNIEIPDEQAEKIVNVGDVVKYIEDNKLA
4KEH Chain:C ((5-76))
----ERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA-
General information:
TITO was launched using:
RESULT:
Template:
4KEH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46968 for 483 contacts (-97.2/contact) +
2D Compatibility (PS) -7759 + (NN) -2758 + (LL) 836
1D Compatibility (HY) -7200 + (ID) 2000
Total energy: -65849.0 ( -136.33 by residue)
QMean score : 0.840
(partial model without unconserved sides chains):
PDB file :
Tito_4KEH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KEH-query.scw
PDB file :
Tito_Scwrl_4KEH.pdb
: