Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLDQLEV-SHDADSLCVVIEISKHSN-IKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDVAFQAGSVVKARLVGVLNMEDESGMDEKLLALPIDKIDPTHSYVKDIDDLSKHTLDKIKHFFETYKDLEPNKWVKVKGFENKESAIKVLEKAIKAYQG
3FQ3 Chain:B ((22-195))
MNIDAISIGSNPPEDVNVIIEVPVGGQPIKYEMDKKAGALIVDRFLYTPMTYPGNYGFVPHTLSEDGDPIDVLVCNTRPLIPGCVINVRPIGVLVMEDNSGKDEKIIAVPSPHLTRRYEKIHDYTDMPEITLKQIAHFFEHYKDLEPGKWVKIGDWGDEDYARKFIVEAIERAK-
General information:
TITO was launched using:
RESULT:
Template:
3FQ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63218 for 1308 contacts (-48.3/contact) +
2D Compatibility (PS) -18372 + (NN) -5726 + (LL) -172
1D Compatibility (HY) -18400 + (ID) 3850
Total energy: -109738.0 ( -83.90 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_3FQ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FQ3-query.scw
PDB file :
Tito_Scwrl_3FQ3.pdb
: