Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKATQSTINDFFALTGTIFSIPVYQRNYTWEEENCEKLLQDIVNISQNKKTHFMGSITYILHLIDDEKSLRQLQEFVIIDGQQRITTIMLLLKAIETKIQNEGIKKEIDGLLNLSGQRLRLKPIKSDKEAFDLVMQNRSHEIQGVSHIKNNYKFFTKELDNYISKGYRIEEIYGAFLWLKIVAIGLELGEDDPQVVFESINATGVQLKGLDLIRNYLMMGENSDNQNRLYNTYWVPLENWLGEKDLNDFIKTYLRIYFE-DRVKEGEREVYYALKAHHRDNFPNNIQGLMSDMREYGRIFQIFLDR-DHYFL-HRGDPQQLANLRLRVKDLVKIKFGVAKPFVLRCARDFEEGKLDYE-NFHEILQILISYFVRR-SVCGDSTPTLTRVLYSLYRQLGEDV--SADALKRYLGKSVGQMAFPNDDKIKAAF-LVRNAYAANQVCKFILLEIEKLSNAEPPKEEN----------------LEVEHFYPKTPTQEWRDRV-GDYFTFEQDYLNNFGNLTLSGQNQRLGNKSYEAKIALMEEYSSLHLNDYFTNNTDSWGIEEVRARSEYLADQFCQVGLFKDLPKEYRARELHKTLDDNLTNHNLQSVKLPNDQRRMAGNAKELASVVIDYLLENAREAFESYTDDESQKYIYWSKAKAEARDRDGTLVVPFEKYGFYFVSNASYQTTGSNLKDLILGCNLNPRDFVVE |
| 3GN6 Chain:A ((22-321)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FNPWTDAALDTIVNQALTLYAEMR------------VVPAHHDAFLAAIDTVSAKLRVLPGFLSLALKQMSGDSTMVKNYPETYKGV-LATAYLDGVAAGTQPYFYNLFVR-FADGRAARAAGFEALFETHIHPLLHAMAD-GPELLAYRAVLQSVVAGDRHAIYRGAEEIRSFLRRPV-ELPERETVTVENHVMVPEDKHAAWEPQVAILLQVAQDTF-EPQDEPSGVGLPGARDNRYYRKALSTEILRNAHADGGLRAYIMHGVWESVWDHENSHLDPRFLAAAGPVGAAAVVGPVEPFYLTRRLVVAD---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39807 for 2069 contacts (-19.2/contact) +
2D Compatibility (PS) -27941 + (NN) -4737 + (LL) 29200
1D Compatibility (HY) -10400 + (ID) 2200
Total energy: -55885.0 ( -27.01 by residue)
QMean score : 0.199
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