Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------MRFFILFFMGMLGVGFSQTELDLKDLEKKPAGIV--RDYYLWRYISDKKTSLENAKKAYELTQNKNSALQKAMQEKGVENSDKSPDAKMPEDIYCKQITLESMLETTDAFQASCIAIALKSKI----------RDFDKIPIQTFKPLQEKIKEAYPILYEELEILQSKNVSASLFKANAQVFSALFNHLSYEKKLQIFEKHIPIKELNRLLDEDYPAFNRLI-----YQVILDPKLDHFKDALAKSNATQSNAQTFFILGINEILHKKTSKALKYFERSEAVVK--DDDFSKDRAIFWQYLASKKKKTLEHLSQSPALNLYSLYASRKLKTTPSYRIISHIQNLSQENPPFNTYDPFSWQIFKEKTLSLKDEGAFNAMLKSLYYEKSAPELTYLLSQRNKDKIYYYLSPYEGIIEWQNTDERAMAYAIARQESFLLPALISRSFALGLMQIMPFNVGPFAKSLGMDNVDLNDMFNPNIALKFGNYYLNHLKKEFNHPLFVAYAYNAGPGFLRRWLESSKRFKGKNHFEPWLSMELMPYSETRMYGFRVMLNYLIYQEIFGNFIPIDAFLEQTLNSKDKP |
| 2VSF Chain:A ((5-597)) | YGVALESPTGSGKTIMALKSALQYSSERKLKVLYLVRTNSQEEQVIKELRSLSSTMKIRAIPMQGRVNMCILYRMVDDLHEINAESLAKFCNMKKREVMAGNEAACPYFNFKIRSDETKRFLFDELPTAEEFYDYGERNNVCPYESMKAALPDADIVIAPYAYFLNRSVAEKFLSHWGVSRNQIVIILDEAHNLPDIGRSIGSFRISVESLNRADREAQAYGDPEL-SQKIHVSDLIEMIRSALQSMVSERCGKGDVRIRFQEFMEYMRIMNKRSEREIRSLLNYLYLFGEYVENEKEKVGKVPFSYCSSVASRIIAFSDQDEEKYAAILSPEDGGYMQAACLDPSGILEVLKESKTIHMSGTLDPFDFYSDIT--GFEIPFKKIGEIFPPENRYIAYYDGVSSKYDTLDEKELDRMATVIEDIILKVKKNTIVYFPSYSLMDRVENRVSFEHMKEYRGIDQKELYSMLKKFRRDHGT-IFAVSGGRLSEGNELEMIILAGLPFPR-----PDAINRSLFDYYERKYGKGWEYSVVYPTAIKIRQEIGRLIRSAE-----DTGACVILDKRAGQFRKFIPDMKKTS------DPASDIYNFFISAQAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VSF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29519 for 4248 contacts (-6.9/contact) +
2D Compatibility (PS) -56554 + (NN) -8005 + (LL) 2044
1D Compatibility (HY) -2000 + (ID) 2400
Total energy: -96434.0 ( -22.70 by residue)
QMean score : 0.160
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