Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFAMIGSGGFIAP-KHLQAIRDT--GHFLDCSFDVHDSV-GVLDEYFPQSEFFTNIEDFEKHLEQSKAMGKEINYLSVCTPTHTHFDHIRFGLRNGMHVICEKPLVLDPSEIQELKDLEVKYQKRVFSLLPLRLHCDTLALKEKIKSELDKNPEKVFDITLTYISVQG---KWYFSSWRADVNRSGGLATQMGVNIFDTLLYLFGGVKDKVIN-------REEPDCVCGILFLEHAKI-RWFFSINPEHMGV-AKEKVYHKMILEGE---------EVNLTQSFDNLYIESYKQILAQGG--F-GLDDAAASIKLAYELRNLSLSEPNDDSHALCCKNKTDQ |
| 1ZH8 Chain:A ((19-337)) | IRLGIVGCG-IAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLE--------SGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKAKELVESGAI---GDPVFMNWQIWVGMDENNKYVHTDWRKKPKHVGGFLSDGGVHHAAAMRLILGEIEWISAVAKDLSPLLGGMDFLSSIFEFENGTVGNYTISYSLKGNERFEITGTKGKISISWDKIVLNEEEMKVPQENSYQKEFEDFYQVVAEGKPNDLGSPVQALKDLAFIEACVRSAGNKVFVSSLL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140191 for 2445 contacts (-57.3/contact) +
2D Compatibility (PS) -31196 + (NN) -6119 + (LL) 1000
1D Compatibility (HY) -8000 + (ID) 2350
Total energy: -186856.0 ( -76.42 by residue)
QMean score : 0.428
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