Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MQEIENLHQSVLLQEVLQAFTPLEEGILIDCTLGLGGHSKAILSQKPHLKLIGIDKDKF-AQEIAKERLKEFEGRYNLLSGGFAKRFKEALEIHGERIKGVLVDLGVSSLQLDDDNRGFNFRSHALDMRMDLESELNAQ-KVINSYPVVALE-KIFRDYGEIKEY-KKIAHKIAERRAKKPFKDAKDLSEFLSSLSKNKKIHPATLVFQAVRIEVNSEL-EELKEFLQCARNLKEAILCVISFHSLEDALVKNAFKDYAKNCICDPSSFKCACSNNHALGAILTKKPITPSPEE-IKNNRRSRSAKMRVFQFKP |
| 2P35 Chain:A ((8-259)) | AQQYLKFEDERTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL---------------------------PNTNFGKADLATWKP---AQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQ-EPTHIAMHETADGGPWKDAFKPLPPPSDYFNALSPKSSRVDVWHTVYNH----------PMKDADSIVEWVKGTGLRPYLAAAGEENREAFLADYTRRIAAAY------------------------------PPMADGRLLLRFPRLFVVAVKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28931 for 1815 contacts (-15.9/contact) +
2D Compatibility (PS) -25267 + (NN) -6749 + (LL) 4060
1D Compatibility (HY) 3200 + (ID) 1450
Total energy: -55137.0 ( -30.38 by residue)
QMean score : 0.373
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