Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKALKILSVGALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAIKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH
2XRH Chain:A ((1-100))
------------AIDPFTMAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKKGNMEDMDDDFGLRS----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2XRH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6103 for 628 contacts (-9.7/contact) +
2D Compatibility (PS) -10991 + (NN) -7564 + (LL) 1388
1D Compatibility (HY) -8000 + (ID) 4600
Total energy: -35870.0 ( -57.12 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_2XRH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XRH-query.scw
PDB file :
Tito_Scwrl_2XRH.pdb
: