Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVDSFNRVIDYIRVSVTKQCNFRCQYCMPTTPLDFFDDEELLPLDNVLEFLKIAIDEGVKKIRIT--GGEPLL--RKGLDEFIAKLHAY---NKEVALVLSTNGFSL-KKMAKGLKDAGLSRVNVSLD---SLKSDRVLKISQKDALKNTLEGIEESLKVGLKLKLNTVVMKGVNDDEILELLEYAKNRSI-QIRYIEFMENTHAKSLVKG--LKEKEILDLIAQKYKIMGMEKPKQGSSKIYTLENGYQFGIIAPHSD-DFCQSCNR-IRLASDGKICPCLYYQDAIDAKEAIINKDTKMMKRLLKQSIINKPEKNMWNDKN---------GGTPTRAFYYTGG-------------------------------------------- |
| 4K36 Chain:A ((2-392)) | -------PPLSLLIKPASSGCNLKCTYCFYHSLSDNVKSYGIMRDEVLESMVKRVLNEANGHCSFAFQGGEPTLAGLEFFEKLMELQRKHNYKNLKIYNSLQTNGTLIDESWAKFLSENKF-LVGLSMDGPKEIHNLNRKDCCGLDTFSKVERAAELFKKYKVEFNILCVV-TSNTARHVNKVYKYFKEKDFKFLQFINCLDPLYEEKGKYNYSLKPKDYTKFLKNLFDFWYEDFLNGNRVSIRYFDGLLETILLGKSSSCGMNGTCTCQFVVESDGSVYPCDFYVLDKWRLGNIQDMTMKELFETNKNHEFIKLSFKVHEECKKCKWFRLCKGGCRRCRDSKEDSALELNYYCQSYKEFFEYAFPRLINVANNIVDKLAAALEHHHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40596 for 2411 contacts (-16.8/contact) +
2D Compatibility (PS) -32983 + (NN) -14012 + (LL) 704
1D Compatibility (HY) -14000 + (ID) 2500
Total energy: -103387.0 ( -42.88 by residue)
QMean score : 0.287
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