Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALLEIIHYPSKILRTISKEVVSFDSKLHQQLDDMHETMIASEGIGLAAIQVGLPLRMLIINLPQEDGVQHKEDCLEIINPKWIETKGSIMYREGCLSVPGFYEEVERFEKVKIEYQNRFAEVKILEASELLAVAIQHEIDHLNGVLFVDKLSILKRKKFEKELKELQKKQKHK
1BSJ Chain:A ((1-163))
-SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSE-----NRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA--
General information:
TITO was launched using:
RESULT:
Template:
1BSJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83463 for 1257 contacts (-66.4/contact) +
2D Compatibility (PS) -17359 + (NN) -3792 + (LL) 560
1D Compatibility (HY) -13600 + (ID) 3350
Total energy: -121004.0 ( -96.26 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_1BSJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BSJ-query.scw
PDB file :
Tito_Scwrl_1BSJ.pdb
: