Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MLKNDDFVIAKNQL--GNIVPNSVGVIRAVNGKSAMVLFIGLNELKRVDFSELEAIDIYRTGKGYDKKICNICHILKNTDGFEINQTDAKGRKTTRPSCRECRKNIDGVKL---SSTEKKKMDEIAPPKG--SVFTCPICEKRSIVGVTANLVHDHNHDTGWGREWICDSCNTGLGRFKD---NPKFLEKVIEYLKKYEK-- |
| 1Y88 Chain:A ((16-199)) | NLYFQGHMVARLLEEHGFETKTNVIVQGNCVEQEIDVVAERDGERYMIECKFHN--IPVYTGLKEAMYTYARFLDVEKHGFTQPWIFTNT------KFSEEAKKYAGCV---------GIKLTGWSYPEKEGIEVLLESKGLYPITILRIDKEVLDELVRAGLV------------FCRDVVSAGEEKLREIGLSAKKAREVIAEAKKVIGGS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38513 for 1093 contacts (-35.2/contact) +
2D Compatibility (PS) -17350 + (NN) -2476 + (LL) 888
1D Compatibility (HY) -5600 + (ID) 1950
Total energy: -65001.0 ( -59.47 by residue)
QMean score : 0.316
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