Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKISCLLLVISLFGGFLNASSLYEKLVNKETISVGTEGIYPPFTYHDKEGKLTGYDVEVARELAKELGVKIKFHETSWDIMLTGLKSGRFDMVANQVSLTTKKRQAAFDKSLPYSYSGTIMLVRKDENRIKDIRDIKGL----KAANTLSSTYGEIAFKYDAQIVSVDSMAQALLLVAQKRADLTLNSSLAILNYLNTHKNSPFKIAWESKEKDGGASFVINKHQEKALELINQAMRRLINKGVLKRLGEQFFGKDVSQP |
3I6V Chain:A ((6-221)) | -------------------------------TVRMGTEGAYPPYNFINDAGEVDGFERELGDELCKRAGLTCEWVKNDWDSIIPNLVSGNYDTIIAGMSITDERDE-VIDFTQNYIPPTASSYVATSD-----GADLSGIVAAQTATIQAGYI-----AESGATLVEFATPEETIAAVRNGEADAVFADRDYLVPIVAESGG-ELMFVGDDVPLGGGVGMGLRESDGELRGKFDAAITSMKEDGTLNTMIKKWFGEDAAVY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95787 for 1688 contacts (-56.7/contact) +
2D Compatibility (PS) -23288 + (NN) -15140 + (LL) 3336
1D Compatibility (HY) -8800 + (ID) 2100
Total energy: -141779.0 ( -83.99 by residue)
QMean score : 0.511
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