Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRAFLNRSFAPLLNPNENLLDQVKSSIILKKGVSYFDWGASGLASALVEKRVKSLLPYYANAHSVASKHAILMGMLLKECQEKLKRSLNLSANHCVLSAGYGASSAIKKFQEILGVCIPSKTKKNLEPYLKDMALKRVIVG-PYEHHSNEVS-WREGLCEVVRIPLNEHGLLDLEILEQTLKK-TPNSLVSVSAASNVTGILTPLKEVSSLCKEYRAILALDLANFSAHANPKDC--EYQTGFYAPHKLLGGVGGCGLLGISKDLIDTQI-PPSFSAGGVIKYANRTRHEFIDELPLREEFGTPGLLQFYRSALAYQLRDECGLDFIHKKENNLLRVLVYGLKDLPAINIYGNLTASR-VGVVAFNIGG-ISPYDLARVLSYEYAIETRAGCSCAGPYGHDLLNLNAQKSSDFNAKPGWLRVSLHFTHSIND-IDYLLDSLKKAVKKLR |
| 2Z9V Chain:A ((15-371)) | --------------------------------------AGPVNAYPEVLRGLGRTVL----YDY--D---PAFQLLYEKVVDKAQKAMRLS-NKPVILHGE-PVLGLEAAAASL-ISP----------------DDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLGAPPGLTMMGVSERAWAKMKANPLAPRASMLSIVD---WENAWS-RDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GLSVWAASDSIASPTTTAVRTPDGVDEKALRQAARARYGVVFSSGRGET--------------------LGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z9V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204323 for 3130 contacts (-65.3/contact) +
2D Compatibility (PS) -37967 + (NN) -18563 + (LL) 4572
1D Compatibility (HY) -400 + (ID) 2350
Total energy: -259031.0 ( -82.76 by residue)
QMean score : 0.413
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