Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------------------------MKDTLFNESLNKRFCFDEKVAHVFDDMLERSIPYYHEMLNLGAYFIAQNLKENVYHKSLPKPLIYDLGCSTGNFFIALNQQIQQDIELVGIDNSMPMLKKAQEKLKD--FNNVRFECMDFLEVKFKEASAFSLLFVLQFVRPMQ-REVLLKKIYNSLALNGVLLVGEKIMSEDRILDKQMIELYYLYKQNQGYSHNEIAFKREALENVLVPYSLKENIALLESVGFKHVEALFKWVNFTLLVARKT------------------------------------------------- |
| 4KRI Chain:C ((1-433)) | ASMPAVERQLIECLHHVIKGAEPQQVGILCPQDDQRKALTEQFGSKTATSFCKEVDSLKNLSNLDALIVNQALDEEINDSEKLDKFITAALRSLRTDGVLILRQDLSKVKEMKKMAMLTDYFDVFRLEEGNGNVGFQFYAVNEVLDSVYVHQNWLDFIWTLMKKPFPVSFRDFLDRTQ-YTDTGIFAYEWIFGNN------FISPGGWNQNLAILKRFG-PMKTGQRMLDIGVGIGGGARQAASEF--GLQVHGVDLSTNMLAVALERVHKEKDARVTYAVCDACEYEFEPNS-FDYVFSRDCIQHIKDTDKLFSRIYRALKPGGKVLITMYGVG-----HGTLSESFKEYVSQRQYY----------------LKNLEQIEEIAKKTGFIDIEVENMTPRFKEILLEERERIEQDKETFLAKFSQNAYDGLVSGWKSKLQYIADDNHNWNFFAAVKPQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4KRI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -120573 for 1621 contacts (-74.4/contact) +
2D Compatibility (PS) -22502 + (NN) -8811 + (LL) 3108
1D Compatibility (HY) -7200 + (ID) 1700
Total energy: -157678.0 ( -97.27 by residue)
QMean score : 0.478
|
|
|