Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNLINEKLNNLENSATKSPKEAVVLLNMGGPNSLYEVGVFLKNMFDDPFILTIKNNFMRKMVGKMIVNSRIEKSKKIYEKLGGKSPLTPITF----ALTERLNELDPSRF---YTYAMRYTPPYASMVLQDLALKEIESLVFFSMYPQYSSTTTLSSFNDAF---NALKSLETFRPKVRVIERFYADKKLNEIILNTILSALNNC---KSQDFVLIFSVHGLPKSIVDAGDTYQQECEHHVSLLKELMQQKNIPFKEVLLSYQSKLGPMKWLEPSTEE----LIEKHRKSNIIIYPLAFTIDNSETLYELDMQY-RLMAERLAVKEYLVCPCLNDSIEFAKFIIELVKNLKSE |
2PO5 Chain:B ((1-323)) | ----------------RKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLP---IQNKLAPFIAKRLTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTM--KWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSACSLPMSVVNRGDPYPQEVSATVQKVMERLEYCN-PYR---LVWQSKVGPMPWLGPQTDESIKGLCERGRK-NILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PO5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168666 for 2446 contacts (-69.0/contact) +
2D Compatibility (PS) -32635 + (NN) -13581 + (LL) 1560
1D Compatibility (HY) -25200 + (ID) 5400
Total energy: -243922.0 ( -99.72 by residue)
QMean score : 0.474
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