Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTLFKEITSKCYVNGNEMKENSSNVLDQYFTKPSVALKCFQKACEVIKKYENPDDFIFLEPSAGDGVFYDLFPK------------------------------------------DRRIGIDIEPKRD----------------GFIQCDFLNYKLPVHQKVICLGNPPFGHRGV-------MALEFINHAR--NCDFVCFILPMFFESQGKGSIKYRVKGLNLLYSERLEKNAFIDFKNKEVDVHCVFQIWSKKYQNKKSEFSWYKNRHKEPFSEYIKVFTVSLAKNRECGKEWIFNQKASFYISSTFYKSTQIVENFEEVKYQSGIAVVFTSADKVLNAKLKKLFQEIDWTKYASLATNSCYHLGKSHIFQALHDHLDSLKGN |
| 3K0B Chain:A ((182-352)) | ----------------------------SAPIKETMAAALVLLTSWH-------PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSYELFEEVYGKKATKKRKLYRTDLYQYWGP-------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K0B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72131 for 724 contacts (-99.6/contact) +
2D Compatibility (PS) -11207 + (NN) -6829 + (LL) 13624
1D Compatibility (HY) 0 + (ID) 1000
Total energy: -77543.0 ( -107.10 by residue)
QMean score : 0.321
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