Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEDYAISLEEVNFNDFIVVDVRELDEYEELHLPNATLISVN-DQEKLADFLSQHKDQKVLLHCRAGRRALDAAKSMHELGYT-PYYLEGNVYDFEKYGFRMVYDDTSLSDKKN
2JTQ Chain:A ((2-81))
----------------EHWIDVRVPEQYQQEHVQGAINIPLKEVKERIATA-VPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHVENA-GGLKDIAMPKVKG------------
General information:
TITO was launched using:
RESULT:
Template:
2JTQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32819 for 584 contacts (-56.2/contact) +
2D Compatibility (PS) -8259 + (NN) -1059 + (LL) 2148
1D Compatibility (HY) -1200 + (ID) 1100
Total energy: -42289.0 ( -72.41 by residue)
QMean score : 0.668
(partial model without unconserved sides chains):
PDB file :
Tito_2JTQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JTQ-query.scw
PDB file :
Tito_Scwrl_2JTQ.pdb
: