Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDILNALYHQKDLNDEEVKKLFTLIIDEKVSPAQLGAVLCALKIKGESFKEISVAATTLLEHAPKPFN--SGLDLIDNCGTGGDGLKTINISTIAALIASSMGLSMAKHGSRSVSSHSGSADLLENLGVNIEMNPMQLENCFKQSHFGFLFAPLYHQSFKKSAPLRKELFTKTIFNCLGPLINPLRPKIQLLGVYDKSLCKTMALALKALGVKRAMVVNG-GGTDEIVLHDITHACELKNNEILEYDLSAKDFDLPPYDLKELQIENAKESVQACLDILENKGKDSHTMVVAANVASLLYLSHRAK--DLKEGVSMTLEHLKTKAPYAHLQKIIRLSHA |
| 1VQU Chain:A ((27-374)) | WYLLLQQLIDGESLSRSQAAELMQGWLSEAVPPELSGAILTALNFKGVSADELTGMAEVLQSQSKM---TNSPFSIIDTCGTG---SSTFNISTAVAFVAAAYGVPVAKHGNR--SSLTGSADVLEALGVNLGASPEKVQAALQEVGITFLFAPGWHPALKAVATLRRTLRIRTVFNLLGPLVNPLRPTGQVVGLFTPKLLTTVAQALDNLGKQKAIVLHGRERLDEAGLGDLTDLAVLSDGELQLTTINPQEVGVTPAPIGALRGGDVQENAEILKAVLQGKGTQAQQDAVALNAALALQVAGAVPLLDHAQGVSVAKEILQTGTAWAKLAQLVYFLGN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209252 for 2969 contacts (-70.5/contact) +
2D Compatibility (PS) -34873 + (NN) -16415 + (LL) -344
1D Compatibility (HY) -20800 + (ID) 5650
Total energy: -287334.0 ( -96.78 by residue)
QMean score : 0.587
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