Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKIELLAKFTQIALPNSHPLLKKVLNYAKKHFSQCHMLSSSLLILNDTECFKKNYLLNWVYHALECAHEKDISMHSLEEILQKSHLPIRIKIMAQNTLLEKIEVKVLTFGAEYALFITKHPIAKRFLRQKFSGCVFLETQDELHIRGDSERFWELIVTLNENRIVHNACLDFIYPNGFGKDSYTTMAERKLKECYKALGFIKHENFSEVKKRYLELAKTYHPDLCDLKEKKALYAKRFAIIQEAYSHIKKHA |
2YUA Chain:A ((15-73)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGS---AEAAERFTRISQAYVVLGSAT |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YUA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -19609 for 345 contacts (-56.8/contact) +
2D Compatibility (PS) -6494 + (NN) -5002 + (LL) 16428
1D Compatibility (HY) -800 + (ID) 800
Total energy: -16277.0 ( -47.18 by residue)
QMean score : 0.746
|
|
|