Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LYQMKNKLQVKIPGKLYVAGEYAVVESGHTAILTAVNRYI-TLTLEDSERNELWIPHYENPVSWPVGGELKPDGEHWTFTAEAINIATTFLKSEGIELTPVKMIIETELIDQSGAKYGLGSSAAATVAVINALMTKFYPEISMLKKFKLAALSHLVVQGNGSCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWFMKEPWPMLQIETLEEPVPTFSVGWTGTPVSTGKLVSQIHAFKQEDSKNYQHFLTRNNEIMKQIIQAFHTKDEELLYSAIKENRRILQELGTKAGVNIETSLLKELADSAENMGGAGKSSGSGGGDCGIAFSKTKELAEKLVNEWEKLGIKHLPFHTGRVQITE |
1H74 Chain:A ((1-296)) | -----MKVRVKAPCTSANLG------VGFDVFGLCLKEPYDVIEVEAIDDKEIIIEVD--------DKNIPTDPDKNVAGIVAKKMIDDFNIGKGVKITIKKGV---------KAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMVTNYEPLEVLHIPIDFKLDILIAIPNISINTKEAREILP---------------------------KAVGLKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVRGKLI------PNYFKIKEEVKDKVYGITISGSGPSIIAFPKEEFIDEVENILRDYYENTIRTEVGKGVEVV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H74.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110050 for 2682 contacts (-41.0/contact) +
2D Compatibility (PS) -31568 + (NN) -11914 + (LL) 4692
1D Compatibility (HY) -3600 + (ID) 2750
Total energy: -155190.0 ( -57.86 by residue)
QMean score : 0.345
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