Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRKKGIILVLSVILIFSIGLLVNNLMTNNKDTAKPKKKTVAAVKKKKETPPKPKEPFNIDFTGDIMFDWDLRPVLAEKGMDYPFNNVR-EELKSSDYTFVDLETAITTRTKKVPYQEFWIKSDPSSLTALKNAGVDMVNISNNHILDYYEDGLLDTTAALRANNLAYVGAGKNEDEAYQLKVADIKGNKVGFMSFCHFFPNTGWIADEDTPGVTNGYDLNLVEEKIKEERAKNKDIDYMVVYFHWGVEKTNTPVDY----QTQYVKKLVDDNLVDAIVASHPHWLQGFEVYKDVPIAYSLGNFLFPDYVSGHSAETGIYKLNFDQGK-V-TAHFDPGIISGNQINMLEGSSKTAQLNYLQSISPNATINSNGDISAK |
| 2NXF Chain:A ((3-322)) | ---DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQ-----CVVQLGDI-----IDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQGSDLIGDDIYAYEFSPAPNFRFVLLDAY-DLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGF---------SEQQLQWLDAVLTLSDHKQE---RVLIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDH-DGGRCTDSS-----GAQHITLEGVIETPPHSHAFATAYLYEDRMVMKGR---------------GRVEDLTITYS------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14414 for 2672 contacts (-5.4/contact) +
2D Compatibility (PS) -32460 + (NN) -8857 + (LL) 2564
1D Compatibility (HY) -800 + (ID) 1600
Total energy: -55567.0 ( -20.80 by residue)
QMean score : 0.232
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