Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MYKKLATVGMTVLLVGALSACSFNDDKDTSSNNSNNETTSS-KSSNNESSSDSLQNKSLDMSYEDAINAFKDKHSDAEISSVELEKSLGKY-VYKVDGIS----NDNEYEMKFNAETKEQLSDETDRLDRED-----AGGVEKENEKLS--LDGIKSPKEAMDKA---------------VSEQAGDVTSWKIERELDTTYYEVTVKQDNN-KYEIKLNAKT-----LEILQTEQDD |
| 4O8U Chain:A ((1-227)) | SRIVAADTGGAVLDETFEPIGLIATVAVLVE----------------KPYRSAKEVMVKYANPYDYDLTGRQAIRDEVLLAIELARKVKPD----VIHLDSTLGGIELRKLDEPTIDALGISDKGKEVWKELSKDLQPLARKFWEETNIEIVAIGKSSVPVRIAEIYAGIYSAKWGIENVEKEGHLIIGLPRYMEVNIKDGKIIGRSLDPREGGLYGSAEVSVPEGVKWEIYPNPVARRFMIFEIFS----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 63155 for 1156 contacts (54.6/contact) +
2D Compatibility (PS) -19342 + (NN) -1933 + (LL) 816
1D Compatibility (HY) -6400 + (ID) 1550
Total energy: 34746.0 ( 30.06 by residue)
QMean score : 0.237
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