Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LVQSINTKVDLTIDATAYTGLTDY--GKIMIGDKGFEFFNSRDVRKFVQIPWEEVDQVIVSVMLKGKWIPRYAIKTKRNGTYTFASKRPKEVLRKIRVYVDPANMVSSLSFFDVMKRSFRSIFSKKKNKNK
2DX5 Chain:A ((10-130))
LLEINETLVIQQRGVRVYDGEEKFDAGTLLLSTHRLIWRDQKNNECCMAIPLSQIVFIEEQ--------------------------------AKIVVHLHSKNSYIRLSFKEHGQIEFYRRLSEEMTQRR
General information:
TITO was launched using:
RESULT:
Template:
2DX5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27957 for 644 contacts (-43.4/contact) +
2D Compatibility (PS) -9952 + (NN) -1626 + (LL) 2324
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -42061.0 ( -65.31 by residue)
QMean score : 0.365
(partial model without unconserved sides chains):
PDB file :
Tito_2DX5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DX5-query.scw
PDB file :
Tito_Scwrl_2DX5.pdb
: