Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEYKNGENRIYAVNDEGVEVGEVTFVPTG------EDMFIIDHTGVDDAARGQGIAQELVKRAVEKAKSEGKKIVPLCPF-----AKAEFSKKPEYQEVEASK
1Z4E Chain:A ((55-143))
-------NELIVACNGEEIVGMLQVTFTPYLTYQGSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLG-FK------
General information:
TITO was launched using:
RESULT:
Template:
1Z4E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16374 for 491 contacts (-33.3/contact) +
2D Compatibility (PS) -8861 + (NN) -7627 + (LL) 1004
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -35308.0 ( -71.91 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_1Z4E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z4E-query.scw
PDB file :
Tito_Scwrl_1Z4E.pdb
: