Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MNESNGSMELYLREH-----------------------TEEIINNWLSKIYENTYTSFVYSPQYKDELRADSEQTADLIISYFAGKKAFFEKLDKWLDNMYARRMENEVPLPEVITTLDKLRREFV-----TAVGDFCIHNDEVSKCEFSSS----MAMVNHGFDRINEAFSAMYYNDIVKHL-----------EQQHRLIEEISTPVISITDKLAILPLMGRVDRERAEKLSEITANKCVHLGVEQLCIDL--SGITYFDDALGEMLTNLVTMLKLLGV---------------------EAFISGIQPKMAQQINRVDLNLSIP----AYHSLKAVLQDQTRTI |
| 4WID Chain:A ((10-362)) | KDMALQHAVDLLEKMLADEEKLTEFNLGDPLFESANDDPIKTLEEIIQEGDDVVGAHQLVVTQIKLRVQRNRRLADEIIREQLTDIRKVFSDKFEKLEQGIQNSYLLLDKLKTPFQDMRCLFEVANEQFNDTPVPPQYKEFMVCLKQIVQYAVNSSSLEKFVMLITKKDDIKDRVTYTCMKYLLMAMQGTGGPKAINNEEHAKLFFQLSNYDDLTDANHDGLELIKKLDKEQKEV--AFHVNNFTHL-VTTLGMALYKEGHQKNDEAMLGMHTPITMLSDQVRVLILYLIDEIVHAIHTNSNQSNDELIDGLKPKVRIVINEFHATLMMGIDKMKFYSLNELREIVNDKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WID.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52265 for 1756 contacts (-29.8/contact) +
2D Compatibility (PS) -28365 + (NN) -6042 + (LL) -24
1D Compatibility (HY) -13200 + (ID) 2600
Total energy: -102496.0 ( -58.37 by residue)
QMean score : 0.236
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