Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIANSITDLIGKTPIVKLNRLPEAGSADVYVKLEFQNPGGSVKDRIANAMIESAEKSGALKPGDTII-EPTSGNTGIGLAMVAAAKGYQAIFVMPETMSLERRKLLQAYGAKLVLTPGPDGMKGAIAKAEELAKEN-NYFVPQQFHNPANPAVHEETTGPEIVEAFGKDGLDAFIAGVGTGGTVTGVGHVLKKNYPDVKIYALEPEESPVLSGGSPSPHKIQGIGAGFVPDTLDTKVYDGILKVSSEDALETAREVAKKEGILVGISSGATIKAALDLAK--ELGAGKKVLAIVASNGERYLSTPLYNFED |
| 4AIR Chain:B ((32-335)) | --VAQSIDQLIGQTPALYLNKLNNT-KAKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPGKSVVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALGMKGAVTMAKKIVTANPNAVLADQFATKYNALIHEETTGPEIWEQTNHN-VDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPME--------------------------DRSLIDEVFCVAGDDAIETALKLTRSDGVFCGFSGGANVYAALKIAERPEM-EGKTIVTIIPSFGERYLSTALYR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108886 for 2385 contacts (-45.7/contact) +
2D Compatibility (PS) -30869 + (NN) -17079 + (LL) -4
1D Compatibility (HY) -27200 + (ID) 6600
Total energy: -190638.0 ( -79.93 by residue)
QMean score : 0.549
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