Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNISDIIEAYLKQVLESSEAVEIKRSEIADKFECVPSQINYVINTRFTMERG----YIVESKRGGGGYIRIIKVKMNDKLQLLEAIISMVHDKKVSQSFSEDVILRLLEEEVITKKEARLMVAALDREVLILPLPDRDILRSRILEAMLVALKYD
2G7J Chain:A ((1-112))
---------MYLR------------PDEVARVLEKAGFTVDVVTNKTYGYRRGENYVYVNREARMGRTAL-IIHPRLKDRSSSLADPAS---DIKTCDHYQN--------------FPLYLGGETHEHYGIPHGFSSRIALE-RYLNGLFGD----
General information:
TITO was launched using:
RESULT:
Template:
2G7J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34449 for 798 contacts (-43.2/contact) +
2D Compatibility (PS) -11325 + (NN) 2880 + (LL) 4696
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: -41798.0 ( -52.38 by residue)
QMean score : 0.214
(partial model without unconserved sides chains):
PDB file :
Tito_2G7J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G7J-query.scw
PDB file :
Tito_Scwrl_2G7J.pdb
: