Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEVKEYKQLNGLALAYMGDAVYEKFIREYLLAAGKTKPNQLHKTATKFVSAKGQAVALKAMIAEGFLTEEEDRIAKRGRNAKSYTVPKNTDPGTYSMSTSFEAVLGYLYLAGEMERLQEWMEKALEIVEKGVETN
4RS8 Chain:A ((1-84))
-----------------YIFLTPRAYIIVHLLKVGKAKASEISENTQ--IPYQTVIQNIRWLLAEGYVVKEQKG------EEIYYKL---TDKGKQMATAELEKIRKLVEVV------------------------
General information:
TITO was launched using:
RESULT:
Template:
4RS8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26837 for 544 contacts (-49.3/contact) +
2D Compatibility (PS) -8842 + (NN) -855 + (LL) 4588
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -37096.0 ( -68.19 by residue)
QMean score : 0.231
(partial model without unconserved sides chains):
PDB file :
Tito_4RS8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RS8-query.scw
PDB file :
Tito_Scwrl_4RS8.pdb
: