Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLNLKDTVKLANGVEMPRLGFGVWKVQDGDEAVNSVKWAIEAGYISIDTAAAYKNEEGVGQAIKES----GIKREDLFVTTKLWNAEQGYESTLAAFDESLRKLELDYVDLYLIHWPV--------------------KGKFKDTWRAFEKLYKDKRVRAIGVCNFHEHHLKELMEDA--EIAPMVNQIELHPQLTQEPLRKFCAENNIVVEAWSPLG----------NGKLLSNPEIKAIADAHGKSVAQVILRWDLQIGVVTIPKSVHQERIIQNADIFDFELTEEEVAKISGLNKDERTGPDPDNFNF
4GA8 Chain:A ((5-298))------VELSTKAKMPIVGLGTWKSPLG-KVKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGDDLFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKPVTNQVECHPYLTQEKLIQYCHSKGITVTAYSPLGSPDRPWAKPEDPSLLEDPKIKEIAAKHKKTAAQVLIRFHIQRNVIVIPKSVTPARIVENIQVFDFKLSDEEMATILSFNRNWRA---------


General information:
TITO was launched using:
RESULT:

Template: 4GA8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136031 for 2212 contacts (-61.5/contact) +
2D Compatibility (PS) -28123 + (NN) -9194 + (LL) -264
1D Compatibility (HY) -25600 + (ID) 5750
Total energy: -204962.0 ( -92.66 by residue)
QMean score : 0.582

(partial model without unconserved sides chains):
PDB file : Tito_4GA8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GA8-query.scw
PDB file : Tito_Scwrl_4GA8.pdb: