Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------MQLLKDKFGRVHDYIRISVTDRCNLRCVYC--MPEEGLTFLPHEKVLSK--DEIVSFMELMVKFGIKKVRITGGEPLL--RTDIVEIVRGLGA---IPEIEDISITTNAMYL-AKKAEALKEAGLTRVNISLDSLHADRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVL-IKGQNDDEITDFLRFTKD---KDINIRFIEYMPIGHAGTS---------WKEKYLPLDTIFEACNEAGYEY-----------EPVDSIRGNGPSEN---FRIKGAKGTFGVIHPVSAHFCDSCNRLRLTADGYIKAC------LYWDEEMNIRPFIQDPVKLMQLVQKAIDNKPENHEMALKLQDEVQSNKPTWRRMSQIGG----------------------------- |
| 1OLT Chain:A ((4-444)) | QQIDWDLALIKYYTSYPTALEFSEDFGEQAFLQAVARYPERPLSLYVHIPFCHK---LCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYAQNQKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYSPIEQQWDLLFADYFAEDLKLLAPLAKDGLVDVDEKGIQVTAKGRLLIRNICMCFDTYL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OLT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71346 for 2403 contacts (-29.7/contact) +
2D Compatibility (PS) -34141 + (NN) 3622 + (LL) 152
1D Compatibility (HY) -15600 + (ID) 2350
Total energy: -119663.0 ( -49.80 by residue)
QMean score : 0.348
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