Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFLVDR-GIKMLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAALKATRNNKIGVLGTLGTVESMAYPTALKGLNRRVEVDSLACPKFVSVVES---GEYKSAIAKKVVAESLLPLKSTKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHRF---FTTGSTQIFKDIAKDWLNMPDMTVEHIKLGK |
2JFN Chain:A ((27-267)) | -------FDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKFDFPVVGVV-PAIKPAARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLE-HEAPDAKSADANIAFCMAMTPGAEQLL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JFN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142242 for 1968 contacts (-72.3/contact) +
2D Compatibility (PS) -25077 + (NN) -7216 + (LL) 2604
1D Compatibility (HY) -16400 + (ID) 3800
Total energy: -192131.0 ( -97.63 by residue)
QMean score : 0.496
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