Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKSVNVIGAGLAGSEAVWQLVNRGVKVDLYEMRPVKQTPAHHTDKFAELVCTNSLRANGLTNAVGVIKEEMRML-----DSIIIEA-AD--KAS-----V---PAGGALAVDRHEFSGYITDKVKNHPLVTVHTE-----------------------EVTTIPEGPTIIATGPLTSPALADEIKQLTGEEYLYFYDAAAPIIEKDSIDMDKVYLKSRYDKGEAAYLNCPMSEEEFNAFYEALVTAETAALKEFEKEVFFEGCMPIEVMAKRGIKTMLFGPLKPVGLEDPKTGKRPYAVLQLRQDDAAGTLYNMVGFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAGQMTGVEGYVESAASGLAAGINAANFIQEKELVVFPTETAIGSLAHYITSASKKSFQPMNVNFGLFPELETKIRAKQERNEKLAERALNAIKKVAEEL |
| 3E1T Chain:A ((6-236)) | EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQI------GESLLPATVH--GICAMLGLT-DEMKRAGFPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERK-GVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTRV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40488 for 923 contacts (-43.9/contact) +
2D Compatibility (PS) -13541 + (NN) 548 + (LL) 22268
1D Compatibility (HY) -1600 + (ID) 1350
Total energy: -34163.0 ( -37.01 by residue)
QMean score : 0.314
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