Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------MSTELLDALHVLEHDKGI-SREVLVEAIEAALTSAYKRNFKDAQNVRVDL-NMENGSIRVLARKEAVEQVFDSRLEISMEEA-HKLNPVYQPGDVVELEVT-PKDFGRIAAQTAKQVVTQRVREAERGIIYDEFIDREDDIMTGIVERQDSRFIYVNLGKIE---AILSQNEQMPNETY-HAHDR-IKVYLTKVEKTTK--------GPQIFVSRTHPGLLKRLFEMEVPEIYDGVVEIKSVAREAGDR-S--------------KISVYTAN--------------EEVDPVGACVGPKGARVQTIVNELKGEK--IDIVEWSEDPFTFVANA---LSPSK-VLDV----------IVNEADQATTVIVPDYQLSLAIGKRGQNARLAAKLTGWKIDIKSETVATELGIYPRNGVEAPEVEEAESETFTEDEE |
| 4L8N Chain:A ((6-457)) | NTSICRLGFTYDISQSKNWGNNKPVIKSIIPYSSAEQAGIKKYDVIEEINGVPVTEVSVDEIPQLLNPAGRN------DVLLTISNLSSPSKQVLVKKDCKKSNAITEDQLASAYAMYSLETTNEQEFVCPFKTTVTSDGVDFGNFKTFAFSTIDENNRKLETVINECIENELTKKGLTVDIAKPDLLIQTFYFFDKNPNYLGANEKEPTYRYNFSHSKMEKFPFLNYAAAEAEAEYLLQFGIRIIDQKDIPG--RVLWECEANELLEDSYRLDEYARVHVPLMCMQYPYTKYGRNVPFKVSKKTYNYTGISYDIDKLDQVVDVDRNSPAYAA-GIRPRDIIEKIGRHKMDHSAEEFSSAYKRFITNTMQYRDPKTMFTDANGFKYCMFWDVFKYPQIADASQSSDYLPAFSYLYYFAPYINPSGNNACTFNIKRGKTKLEVIIRP----------TIRSEVTVEIK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L8N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 41553 for 2172 contacts (19.1/contact) +
2D Compatibility (PS) -36885 + (NN) 8418 + (LL) 1372
1D Compatibility (HY) -8000 + (ID) 3450
Total energy: 3008.0 ( 1.38 by residue)
QMean score : 0.160
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