Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKG-HRHIIIRELITSNEIDTQEDLVELLLERDVK-VTQATVSRDIKELHLVKVPTQTGGYKYSLPADNSFNPHQKLKRALIDCFIGIDNVQFMIILKVMPGNGNSVGALIDNLDWPEKAGTICGDDTCLIICRSEENAKTLTDRFIDML
1B4A Chain:A ((4-78))
----GQRHIKIREIIMSNDIETQDELVDRLREAGF-NVTQATVSRDIKEMQLVKVPMANGRYKYSLPSDQRFNPLQKLKR-----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1B4A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30499 for 454 contacts (-67.2/contact) +
2D Compatibility (PS) -8044 + (NN) -4888 + (LL) 4564
1D Compatibility (HY) -7200 + (ID) 2450
Total energy: -48517.0 ( -106.87 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_1B4A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B4A-query.scw
PDB file :
Tito_Scwrl_1B4A.pdb
: