Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------MNEEQLS--KRLEKVASYITKNERIA------DIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEHIDVRKGNGLAVIEKKDVIDTIVIAGMGGALI------------RTILEEGAAKLAGVTKLILQP---NIAAWQLREWSEQNNWLITSEAILREDNKIYEI-----MVLAPSKK-----PVAWTKQEI--------------------FFGPCLLKDQSAIFKSKWR---------------HEANTWQNIIQTISNNQPV--------------SPENQAKIR-ELEHKIALVEDVLK------ |
4QPP Chain:A ((48-376)) | YYECYSDVSVHEEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEA-SAIWQQAREVVRFNGLEDRVHVLPGP-VETVELPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASAELFIVPISDQMLEWRLGFWSQVKQHYGVDMSCLEGFATRCLMGHSEIVVQGLSGEDVLARPQRFAQLELSRAGLEQELEAGVGGRFRCSCYGSAPMHGFAIWFQVTFPGGESEKPLVLSTSPFHPATHWKQALLYLNEPVQVEQDTDVSGEITLLPSRDNPRRLRVLLRYKVGDQEEKTKDFAMED |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29617 for 1558 contacts (-19.0/contact) +
2D Compatibility (PS) -23793 + (NN) 4005 + (LL) 72
1D Compatibility (HY) -13200 + (ID) 2750
Total energy: -65283.0 ( -41.90 by residue)
QMean score : 0.250
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